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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BCOR_1209FHA domain protein. (519 aa)    
Predicted Functional Partners:
BCOR_0093
Serine-threonine protein kinase.
   
 
 0.999
BCOR_1208
DNA and RNA helicase-like protein.
 
     0.925
BCOR_1207
Hypothetical protein.
       0.852
BCOR_1108
Tetratricopeptide TPR_2 repeat protein.
 
   0.777
BCOR_1235
Hypothetical protein.
  
     0.774
BCOR_0024
Hypothetical protein.
  
     0.773
BCOR_0354
Putative ATP-dependent DNA helicase, UvrD/REP family.
  
     0.771
BCOR_1320
Hypothetical protein.
  
     0.771
BCOR_0432
DivIVA domain protein.
  
     0.768
BCOR_0251
Ser/Thr protein phosphatase family protein.
 
     0.767
Your Current Organism:
Bifidobacterium coryneforme
NCBI taxonomy Id: 1687
Other names: AS 1.2279, ATCC 25911, B. coryneforme, BCRC 14675, Bifidobacterium sp. Bma6, CCRC 14675, CCRC:14675, CCUG 34986, DSM 20216, JCM 5819, LMG 18911, LMG:18911
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