BCOR_1218 protein (Bifidobacterium coryneforme)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

BCOR_1218

Extracellular solute-binding protein. (450 aa)

Predicted Functional Partners:

BCOR_1217

0.984

BCOR_1216

0.872

BCOR_0014

0.728

BCOR_1219

0.678

BCOR_0055

0.677

BCOR_0056

0.660

BCOR_0136

0.634

BCOR_0135

0.597

BCOR_0178

0.575

BCOR_0177

0.570

Your Current Organism:

Bifidobacterium coryneforme

NCBI taxonomy Id: 1687
Other names: AS 1.2279, ATCC 25911, B. coryneforme, BCRC 14675, Bifidobacterium sp. Bma6, CCRC 14675, CCRC:14675, CCUG 34986, DSM 20216, JCM 5819, LMG 18911, LMG:18911

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
BCOR_0014	BCOR_0055	ATP binding protein of ABC transporter; Belongs to the ABC transporter superfamily.	ABC transporter inner membrane protein.	0.848
BCOR_0014	BCOR_0056	ATP binding protein of ABC transporter; Belongs to the ABC transporter superfamily.	ABC superfamily ATP binding cassette transporter, membrane protein.	0.867
BCOR_0014	BCOR_0135	ATP binding protein of ABC transporter; Belongs to the ABC transporter superfamily.	Sugar-binding protein of ABC transporter system.	0.975
BCOR_0014	BCOR_0136	ATP binding protein of ABC transporter; Belongs to the ABC transporter superfamily.	Sugar ABC transporter permease.	0.969
BCOR_0014	BCOR_0177	ATP binding protein of ABC transporter; Belongs to the ABC transporter superfamily.	Binding-protein-dependent transporter inner membrane component.	0.991
BCOR_0014	BCOR_0178	ATP binding protein of ABC transporter; Belongs to the ABC transporter superfamily.	Binding-protein-dependent transport systems inner membrane component.	0.980
BCOR_0014	BCOR_1216	ATP binding protein of ABC transporter; Belongs to the ABC transporter superfamily.	ABC transporter, permease protein.	0.899
BCOR_0014	BCOR_1217	ATP binding protein of ABC transporter; Belongs to the ABC transporter superfamily.	ABC transporter, permease protein.	0.947
BCOR_0014	BCOR_1218	ATP binding protein of ABC transporter; Belongs to the ABC transporter superfamily.	Extracellular solute-binding protein.	0.728
BCOR_0055	BCOR_0014	ABC transporter inner membrane protein.	ATP binding protein of ABC transporter; Belongs to the ABC transporter superfamily.	0.848
BCOR_0055	BCOR_0056	ABC transporter inner membrane protein.	ABC superfamily ATP binding cassette transporter, membrane protein.	0.977
BCOR_0055	BCOR_0136	ABC transporter inner membrane protein.	Sugar ABC transporter permease.	0.825
BCOR_0055	BCOR_0178	ABC transporter inner membrane protein.	Binding-protein-dependent transport systems inner membrane component.	0.845
BCOR_0055	BCOR_1216	ABC transporter inner membrane protein.	ABC transporter, permease protein.	0.862
BCOR_0055	BCOR_1218	ABC transporter inner membrane protein.	Extracellular solute-binding protein.	0.677
BCOR_0056	BCOR_0014	ABC superfamily ATP binding cassette transporter, membrane protein.	ATP binding protein of ABC transporter; Belongs to the ABC transporter superfamily.	0.867
BCOR_0056	BCOR_0055	ABC superfamily ATP binding cassette transporter, membrane protein.	ABC transporter inner membrane protein.	0.977
BCOR_0056	BCOR_0135	ABC superfamily ATP binding cassette transporter, membrane protein.	Sugar-binding protein of ABC transporter system.	0.856
BCOR_0056	BCOR_0177	ABC superfamily ATP binding cassette transporter, membrane protein.	Binding-protein-dependent transporter inner membrane component.	0.861
BCOR_0056	BCOR_1217	ABC superfamily ATP binding cassette transporter, membrane protein.	ABC transporter, permease protein.	0.873

page 1 of 4

Server load: low (28%) [HD]

Permalink

Network

Neighborhood

Experiments

Co-occurrence

Databases

Co-expression

Textmining

Fusion

© STRING Consortium 2026

Credits

Access

Info

About