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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BCOR_1268Glutamine transporter permease. (217 aa)    
Predicted Functional Partners:
BCOR_1266
Glutamine transport ATP-binding protein glnQ.
  0.998
BCOR_1265
Glutamine-binding protein.
  0.994
BCOR_1267
Glutamine transporter permease.
 
  
 
0.988
BCOR_0562
Glutamate transport ATP-binding protein.
   0.876
BCOR_0557
Glutamate transport ATP-binding protein gluA.
   0.874
BCOR_1043
ABC transporter ATP-binding protein.
   0.868
BCOR_1135
Amino acid transport ATP-binding protein.
   0.837
BCOR_1045
Solute binding protein of ABC transporter system.
   0.674
BCOR_0600
Glutamate-binding protein GluB; Belongs to the bacterial solute-binding protein 3 family.
 
   0.659
BCOR_0563
Permease protein of ABC transporter system.
 
 
0.590
Your Current Organism:
Bifidobacterium coryneforme
NCBI taxonomy Id: 1687
Other names: AS 1.2279, ATCC 25911, B. coryneforme, BCRC 14675, Bifidobacterium sp. Bma6, CCRC 14675, CCRC:14675, CCUG 34986, DSM 20216, JCM 5819, LMG 18911, LMG:18911
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