nth protein (Bifidobacterium coryneforme) - STRING interaction network

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[Homology]

Score

nth

Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. (244 aa)

Predicted Functional Partners:

BCOR_1060

0.978

BCOR_1286

0.842

BCOR_1288

0.785

polA

0.740

valS

0.691

BCOR_1285

0.640

ung

0.564

BCOR_0344

0.484

coaE

0.425

trpA

0.421

Your Current Organism:

Bifidobacterium coryneforme

NCBI taxonomy Id: 1687
Other names: AS 1.2279, ATCC 25911, B. coryneforme, BCRC 14675, Bifidobacterium sp. Bma6, CCRC 14675, CCRC:14675, CCUG 34986, DSM 20216, JCM 5819, LMG 18911, LMG:18911

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BCOR_0344	BCOR_1060	BCOR_0344	BCOR_1060	A/G-specific adenine DNA glycosylase.	Exodeoxyribonuclease III.	0.853
BCOR_0344	nth	BCOR_0344	BCOR_1287	A/G-specific adenine DNA glycosylase.	Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate.	0.484
BCOR_0344	polA	BCOR_0344	BCOR_0787	A/G-specific adenine DNA glycosylase.	DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.	0.543
BCOR_1060	BCOR_0344	BCOR_1060	BCOR_0344	Exodeoxyribonuclease III.	A/G-specific adenine DNA glycosylase.	0.853
BCOR_1060	nth	BCOR_1060	BCOR_1287	Exodeoxyribonuclease III.	Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate.	0.978
BCOR_1060	polA	BCOR_1060	BCOR_0787	Exodeoxyribonuclease III.	DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.	0.909
BCOR_1060	ung	BCOR_1060	BCOR_0929	Exodeoxyribonuclease III.	uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine.	0.619
BCOR_1285	BCOR_1286	BCOR_1285	BCOR_1286	Hypothetical protein.	Transcriptional regulatory protein.	0.560
BCOR_1285	BCOR_1288	BCOR_1285	BCOR_1288	Hypothetical protein.	Solute binding protein of ABC transporter system for peptides.	0.623
BCOR_1285	nth	BCOR_1285	BCOR_1287	Hypothetical protein.	Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate.	0.640
BCOR_1285	valS	BCOR_1285	BCOR_1289	Hypothetical protein.	Valyl-tRNA synthetase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner.	0.532
BCOR_1286	BCOR_1285	BCOR_1286	BCOR_1285	Transcriptional regulatory protein.	Hypothetical protein.	0.560
BCOR_1286	BCOR_1288	BCOR_1286	BCOR_1288	Transcriptional regulatory protein.	Solute binding protein of ABC transporter system for peptides.	0.786
BCOR_1286	nth	BCOR_1286	BCOR_1287	Transcriptional regulatory protein.	Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate.	0.842
BCOR_1286	valS	BCOR_1286	BCOR_1289	Transcriptional regulatory protein.	Valyl-tRNA synthetase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner.	0.700
BCOR_1288	BCOR_1285	BCOR_1288	BCOR_1285	Solute binding protein of ABC transporter system for peptides.	Hypothetical protein.	0.623
BCOR_1288	BCOR_1286	BCOR_1288	BCOR_1286	Solute binding protein of ABC transporter system for peptides.	Transcriptional regulatory protein.	0.786
BCOR_1288	nth	BCOR_1288	BCOR_1287	Solute binding protein of ABC transporter system for peptides.	Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate.	0.785
BCOR_1288	valS	BCOR_1288	BCOR_1289	Solute binding protein of ABC transporter system for peptides.	Valyl-tRNA synthetase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner.	0.734
coaE	nth	BCOR_0793	BCOR_1287	Dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.	Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate.	0.425

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