STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BCOR_1370ABC transporter. (302 aa)    
Predicted Functional Partners:
BCOR_1369
ABC-2 type transporter.
 
  
 0.910
BCOR_0191
ABC-type sugar transport system.
  
     0.705
BCOR_1368
ABC superfamily ATP binding cassette transporter, ABC protein.
 
    
0.592
BCOR_0996
AAA family ATPase with putative Homeodomain-like domain.
  
     0.548
BCOR_1367
Putative ABC transporter, permease protein.
  
  
 0.466
BCOR_0650
Hypothetical protein.
  
   0.463
BCOR_0945
AAA family ATPase.
  
 
   0.462
rpsE
30S ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.
  
    0.434
BCOR_1366
Calcium-transporting ATPase.
  
   0.416
Your Current Organism:
Bifidobacterium coryneforme
NCBI taxonomy Id: 1687
Other names: AS 1.2279, ATCC 25911, B. coryneforme, BCRC 14675, Bifidobacterium sp. Bma6, CCRC 14675, CCRC:14675, CCUG 34986, DSM 20216, JCM 5819, LMG 18911, LMG:18911
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.