STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BCUN_0031Bacterial extracellular solute-binding protein, family 5. (517 aa)    
Predicted Functional Partners:
BCUN_0029
Oligopeptide transport ATP-binding protein OppD; Belongs to the binding-protein-dependent transport system permease family.
 
 0.989
BCUN_0030
Glutathione ABC transporter, permease protein GsiC.
 
  0.956
BCUN_0028
Dipeptide ABC transporter, ATP-binding protein DppF.
 
 
 0.940
BCUN_0027
Dihydrodipicolinate synthase family protein; Catalyzes the reversible aldol cleavage of N-acetylneuraminic acid (sialic acid; Neu5Ac) to form pyruvate and N-acetylmannosamine (ManNAc) via a Schiff base intermediate. Belongs to the DapA family.
 
     0.841
BCUN_1599
Peptide ABC transporter permease.
 
  0.775
BCUN_0032
UDP-N-acetylglucosamine diphosphorylase.
 
     0.755
BCUN_1600
Peptide ABC transporter permease.
 
  0.745
BCUN_0109
Glutathione ABC transporter, permease protein GsiC.
 
  0.725
BCUN_0110
Peptides ABC transporter permease.
 
  0.694
nanE
N-acetylmannosamine-6-P epimerase; Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N- acetylglucosamine-6-phosphate (GlcNAc-6-P).
 
     0.687
Your Current Organism:
Bifidobacterium cuniculi
NCBI taxonomy Id: 1688
Other names: AS 1.2239, ATCC 27916, B. cuniculi, BCRC 14672, CCRC 14672, CCRC:14672, CCUG 24610, CIP 103379, DSM 20435, LMG 10738, LMG:10738, strain RA93
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