Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
BCUN_0114 | BCUN_0115 | Cytosolic protein. | Mn2+/Zn2+ ABC transporter permease. | 0.764 |
BCUN_0114 | BCUN_0116 | Cytosolic protein. | Putative tRNA (Uracil-5-)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | 0.690 |
BCUN_0114 | BCUN_0117 | Cytosolic protein. | Sugar ABC transporter periplasmic protein. | 0.682 |
BCUN_0114 | BCUN_0118 | Cytosolic protein. | Cation-transporting ATPase. | 0.529 |
BCUN_0114 | BCUN_0917 | Cytosolic protein. | Putative integral membrane protein. | 0.693 |
BCUN_0114 | BCUN_1665 | Cytosolic protein. | Hypothetical protein. | 0.594 |
BCUN_0115 | BCUN_0114 | Mn2+/Zn2+ ABC transporter permease. | Cytosolic protein. | 0.764 |
BCUN_0115 | BCUN_0116 | Mn2+/Zn2+ ABC transporter permease. | Putative tRNA (Uracil-5-)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | 0.801 |
BCUN_0115 | BCUN_0117 | Mn2+/Zn2+ ABC transporter permease. | Sugar ABC transporter periplasmic protein. | 0.790 |
BCUN_0115 | BCUN_0118 | Mn2+/Zn2+ ABC transporter permease. | Cation-transporting ATPase. | 0.665 |
BCUN_0115 | BCUN_0688 | Mn2+/Zn2+ ABC transporter permease. | Hypothetical protein. | 0.650 |
BCUN_0115 | BCUN_0917 | Mn2+/Zn2+ ABC transporter permease. | Putative integral membrane protein. | 0.661 |
BCUN_0115 | BCUN_1352 | Mn2+/Zn2+ ABC transporter permease. | ferredoxin/ferredoxin-NADP reductase. | 0.610 |
BCUN_0115 | BCUN_1665 | Mn2+/Zn2+ ABC transporter permease. | Hypothetical protein. | 0.608 |
BCUN_0115 | BCUN_1669 | Mn2+/Zn2+ ABC transporter permease. | DivIVA domain containing protein. | 0.711 |
BCUN_0115 | BCUN_1675 | Mn2+/Zn2+ ABC transporter permease. | ABC transporter substrate-binding protein. | 0.737 |
BCUN_0116 | BCUN_0114 | Putative tRNA (Uracil-5-)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | Cytosolic protein. | 0.690 |
BCUN_0116 | BCUN_0115 | Putative tRNA (Uracil-5-)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | Mn2+/Zn2+ ABC transporter permease. | 0.801 |
BCUN_0116 | BCUN_0117 | Putative tRNA (Uracil-5-)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | Sugar ABC transporter periplasmic protein. | 0.840 |
BCUN_0116 | BCUN_0118 | Putative tRNA (Uracil-5-)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | Cation-transporting ATPase. | 0.772 |
page 1 of 3