STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BCUN_0147Non-specific serine/threonine protein kinase. (683 aa)    
Predicted Functional Partners:
BCUN_0787
Putative oxoglutarate dehydrogenase inhibitor.
  
 
 
 0.999
BCUN_1369
Phosphoprotein phosphatase.
 
 0.921
BCUN_0637
Putative phosphoprotein phosphatase.
 
 0.919
BCUN_1368
Putative FHA domain protein.
 
 
 
 0.852
BCUN_3456
Hypothetical protein.
 
 
 
 0.852
BCUN_0696
Etk-like tyrosine kinase.
    
   0.766
BCUN_0148
Bifunctional short chain isoprenyl diphosphate synthase; Belongs to the FPP/GGPP synthase family.
  
    0.737
BCUN_0149
Hypothetical protein.
       0.612
BCUN_1507
transRDD family protein.
   
   0.592
BCUN_0639
Putative FHA domain protein.
    
   0.589
Your Current Organism:
Bifidobacterium cuniculi
NCBI taxonomy Id: 1688
Other names: AS 1.2239, ATCC 27916, B. cuniculi, BCRC 14672, CCRC 14672, CCRC:14672, CCUG 24610, CIP 103379, DSM 20435, LMG 10738, LMG:10738, strain RA93
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