STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BCUN_0152Phosphatidylinositol alpha-mannosyltransferase. (408 aa)    
Predicted Functional Partners:
BCUN_0810
Phosphatidylinositol alpha-mannosyltransferase.
  
  
 
0.926
BCUN_0811
Alpha-mannosyl-phosphatidylinositol acyltransferase.
 
  
 0.814
BCUN_0440
Alpha/beta superfamily hydrolase.
   
 
 0.792
BCUN_1906
Alpha/beta superfamily hydrolase.
   
 
 0.792
glgB
Glycogen branching protein; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
 0.776
BCUN_1980
dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.
  
  
 0.757
BCUN_1603
ATP-dependent DNA helicase RecQ.
    
 
 0.682
BCUN_0153
Multidrug resistance protein.
  
    0.617
BCUN_2143
UDP-galactopyranose mutase.
  
 
 0.607
BCUN_0354
Pullulanase.
  
 0.585
Your Current Organism:
Bifidobacterium cuniculi
NCBI taxonomy Id: 1688
Other names: AS 1.2239, ATCC 27916, B. cuniculi, BCRC 14672, CCRC 14672, CCRC:14672, CCUG 24610, CIP 103379, DSM 20435, LMG 10738, LMG:10738, strain RA93
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