STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BCUN_0183HsdR family type I site-specific deoxyribonuclease. (1056 aa)    
Predicted Functional Partners:
BCUN_0179
Type I restriction system adenine methylase HsdM.
 
 
 0.975
BCUN_1248
Putative type I restriction-modification system, M subunit N-6 Adenine-specific DNA methylase.
 
 
 0.857
BCUN_0574
Type I restriction-modification system methyltransferase subunit.
  
 
 0.817
BCUN_0885
Restriction enzyme BgcI subunit beta.
  
 
 0.812
BCUN_0886
Restriction enzyme BgcI subunit alpha.
  
 
 0.812
BCUN_0178
Phage family integrase; Belongs to the 'phage' integrase family.
  
     0.742
BCUN_1247
Restriction modification system DNA specificity subunit.
  
  
 0.716
BCUN_0180
Hypothetical protein.
       0.697
BCUN_0181
Hypothetical protein.
       0.697
BCUN_0182
Hypothetical protein.
       0.697
Your Current Organism:
Bifidobacterium cuniculi
NCBI taxonomy Id: 1688
Other names: AS 1.2239, ATCC 27916, B. cuniculi, BCRC 14672, CCRC 14672, CCRC:14672, CCUG 24610, CIP 103379, DSM 20435, LMG 10738, LMG:10738, strain RA93
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.