STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BCUN_0331NTP pyrophosphohydrolase. (186 aa)    
Predicted Functional Partners:
BCUN_0327
ADP-ribose pyrophosphatase.
 
  
 0.954
BCUN_0330
Putative NIF3 family protein.
       0.781
BCUN_0332
Glycogen operon protein GlgX; Belongs to the glycosyl hydrolase 13 family.
       0.718
polA
DNA-directed DNA polymerase; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
       0.713
BCUN_1213
Aminopeptidase C; Belongs to the peptidase C1 family.
    
   0.649
BCUN_1536
Aminopeptidase C; Belongs to the peptidase C1 family.
    
   0.649
nadE
Glutamine-dependent NAD() synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
  
 
  0.625
BCUN_1402
NAD synthetase; In the C-terminal section; belongs to the NAD synthetase family.
  
 
  0.625
BCUN_0328
Two-component system response regulator.
       0.612
BCUN_0376
N-acetylmuramoyl-L-alanine amidase.
  
  
  0.423
Your Current Organism:
Bifidobacterium cuniculi
NCBI taxonomy Id: 1688
Other names: AS 1.2239, ATCC 27916, B. cuniculi, BCRC 14672, CCRC 14672, CCRC:14672, CCUG 24610, CIP 103379, DSM 20435, LMG 10738, LMG:10738, strain RA93
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