Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| BCUN_0431 | BCUN_0432 | BCUN_0431 | BCUN_0432 | Histidine triad (HIT) protein. | PhoH-like protein. | 0.734 |
| BCUN_0431 | BCUN_0434 | BCUN_0431 | BCUN_0434 | Histidine triad (HIT) protein. | CBS domain containing protein. | 0.684 |
| BCUN_0431 | era | BCUN_0431 | BCUN_0435 | Histidine triad (HIT) protein. | GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | 0.717 |
| BCUN_0431 | ybeY | BCUN_0431 | BCUN_0433 | Histidine triad (HIT) protein. | Metalloprotease; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.792 |
| BCUN_0432 | BCUN_0431 | BCUN_0432 | BCUN_0431 | PhoH-like protein. | Histidine triad (HIT) protein. | 0.734 |
| BCUN_0432 | BCUN_0434 | BCUN_0432 | BCUN_0434 | PhoH-like protein. | CBS domain containing protein. | 0.907 |
| BCUN_0432 | era | BCUN_0432 | BCUN_0435 | PhoH-like protein. | GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | 0.855 |
| BCUN_0432 | hpf | BCUN_0432 | BCUN_0142 | PhoH-like protein. | Sigma 54 modulation protein/ribosomal protein S30EA; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth. | 0.405 |
| BCUN_0432 | recO | BCUN_0432 | BCUN_1673 | PhoH-like protein. | DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination. | 0.720 |
| BCUN_0432 | ybeY | BCUN_0432 | BCUN_0433 | PhoH-like protein. | Metalloprotease; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.977 |
| BCUN_0434 | BCUN_0431 | BCUN_0434 | BCUN_0431 | CBS domain containing protein. | Histidine triad (HIT) protein. | 0.684 |
| BCUN_0434 | BCUN_0432 | BCUN_0434 | BCUN_0432 | CBS domain containing protein. | PhoH-like protein. | 0.907 |
| BCUN_0434 | era | BCUN_0434 | BCUN_0435 | CBS domain containing protein. | GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | 0.955 |
| BCUN_0434 | ybeY | BCUN_0434 | BCUN_0433 | CBS domain containing protein. | Metalloprotease; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.925 |
| era | BCUN_0431 | BCUN_0435 | BCUN_0431 | GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | Histidine triad (HIT) protein. | 0.717 |
| era | BCUN_0432 | BCUN_0435 | BCUN_0432 | GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | PhoH-like protein. | 0.855 |
| era | BCUN_0434 | BCUN_0435 | BCUN_0434 | GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | CBS domain containing protein. | 0.955 |
| era | recO | BCUN_0435 | BCUN_1673 | GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination. | 0.670 |
| era | ybeY | BCUN_0435 | BCUN_0433 | GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | Metalloprotease; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.939 |
| hpf | BCUN_0432 | BCUN_0142 | BCUN_0432 | Sigma 54 modulation protein/ribosomal protein S30EA; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth. | PhoH-like protein. | 0.405 |
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