STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BCUN_0491Alpha beta hydrolase. (216 aa)    
Predicted Functional Partners:
BCUN_0490
LysR-type transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
       0.853
nnrD
Carbohydrate kinase; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. In the C-terminal section; belongs to the NnrD/CARKD family.
 
    0.723
BCUN_2070
HAD-superfamily hydrolase.
  
  
 
0.687
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
    
 0.658
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
    
  0.652
BCUN_0798
Membrane channel protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.
  
 
   0.647
BCUN_1280
Glycosyltransferase.
  
 0.629
BCUN_0492
Thioredoxin reductase-like protein.
 
     0.617
BCUN_0753
Inosine 5-monophosphate dehydrogenase.
    
 0.597
BCUN_1757
Glycerol uptake facilitator-like protein in Mip family; Belongs to the MIP/aquaporin (TC 1.A.8) family.
    
   0.586
Your Current Organism:
Bifidobacterium cuniculi
NCBI taxonomy Id: 1688
Other names: AS 1.2239, ATCC 27916, B. cuniculi, BCRC 14672, CCRC 14672, CCRC:14672, CCUG 24610, CIP 103379, DSM 20435, LMG 10738, LMG:10738, strain RA93
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