STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BCUN_0626Acetyltransferase, GNAT family. (194 aa)    
Predicted Functional Partners:
BCUN_0624
Transposase IS605 OrfB.
 
    0.904
BCUN_0625
Transposase IS605 OrfB.
  
    0.776
BCUN_1102
Transposase IS605 OrfB.
 
    0.712
BCUN_0536
IS605 OrfB family transposase.
 
    0.689
BCUN_0623
Hypothetical protein.
       0.648
BCUN_0627
Exopolyphosphatase.
       0.615
BCUN_1378
Transposase DNA-binding domain protein.
  
    0.553
BCUN_2245
Transposase IS605 OrfB.
 
    0.542
BCUN_1528
Transposase IS605 OrfB.
 
    0.504
BCUN_1101
Transposase IS605 OrfB.
 
    0.493
Your Current Organism:
Bifidobacterium cuniculi
NCBI taxonomy Id: 1688
Other names: AS 1.2239, ATCC 27916, B. cuniculi, BCRC 14672, CCRC 14672, CCRC:14672, CCUG 24610, CIP 103379, DSM 20435, LMG 10738, LMG:10738, strain RA93
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.