STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BCUN_0629Acetyltransferase, GNAT family. (234 aa)    
Predicted Functional Partners:
BCUN_0631
ATP-dependent DNA helicase, UvrD/REP family.
 
    0.841
BCUN_0630
ATP-dependent DNA helicase; Belongs to the helicase family. UvrD subfamily.
 
    0.789
BCUN_0628
Transporter.
 
     0.704
BCUN_2093
Hypothetical protein.
  
     0.626
aroK
3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ); Belongs to the sugar phosphate cyclases superfamily. Dehydroquinate synthase family.
    
  0.617
BCUN_1426
Hypothetical protein.
  
     0.601
BCUN_2191
Threonine dehydratase.
    
  0.559
BCUN_1193
Hypothetical protein.
  
     0.557
BCUN_0751
ABC-type xylose transport system protein.
  
     0.531
BCUN_1233
Membrane protein.
  
     0.505
Your Current Organism:
Bifidobacterium cuniculi
NCBI taxonomy Id: 1688
Other names: AS 1.2239, ATCC 27916, B. cuniculi, BCRC 14672, CCRC 14672, CCRC:14672, CCUG 24610, CIP 103379, DSM 20435, LMG 10738, LMG:10738, strain RA93
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.