STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BCUN_0634Putative methanol dehydrogenase regulatory protein. (422 aa)    
Predicted Functional Partners:
BCUN_0635
Hypothetical protein.
 
  
 0.941
BCUN_0636
Transglutaminase domain-containing protein.
 
   
 0.815
BCUN_1318
Hypothetical protein.
 
  
 0.812
BCUN_0637
Putative phosphoprotein phosphatase.
 
     0.800
BCUN_0633
Large protein with C- fibronectin type III domain protein.
       0.753
BCUN_0632
Putative serine/threonine-protein kinase PknK.
     
 0.705
BCUN_0638
Hypothetical protein.
       0.691
Your Current Organism:
Bifidobacterium cuniculi
NCBI taxonomy Id: 1688
Other names: AS 1.2239, ATCC 27916, B. cuniculi, BCRC 14672, CCRC 14672, CCRC:14672, CCUG 24610, CIP 103379, DSM 20435, LMG 10738, LMG:10738, strain RA93
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.