STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BCUN_0637Putative phosphoprotein phosphatase. (331 aa)    
Predicted Functional Partners:
BCUN_1373
Serine-threonine protein kinase.
 
 0.990
BCUN_0632
Putative serine/threonine-protein kinase PknK.
 
 0.951
BCUN_0147
Non-specific serine/threonine protein kinase.
 
 0.919
BCUN_1372
Serine-threonine protein kinase.
 
 0.905
BCUN_0910
Serine/threonine protein kinase.
 
 0.902
BCUN_1417
Serine/threonine protein kinase.
 
 0.899
BCUN_0635
Hypothetical protein.
 
     0.880
BCUN_0636
Transglutaminase domain-containing protein.
 
     0.878
BCUN_0634
Putative methanol dehydrogenase regulatory protein.
 
     0.800
BCUN_0798
Membrane channel protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.
    
   0.771
Your Current Organism:
Bifidobacterium cuniculi
NCBI taxonomy Id: 1688
Other names: AS 1.2239, ATCC 27916, B. cuniculi, BCRC 14672, CCRC 14672, CCRC:14672, CCUG 24610, CIP 103379, DSM 20435, LMG 10738, LMG:10738, strain RA93
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