STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BCUN_0672Sugar ABC transporter permease. (277 aa)    
Predicted Functional Partners:
BCUN_0671
Sugar ABC transporter substrate-binding protein.
 0.984
BCUN_1415
Sugars ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.975
BCUN_2074
Sugar ABC transporter substrate-binding protein.
 
 0.939
BCUN_2090
Sugar ABC superfamily ATP binding cassette transporter, membrane protein.
  0.938
BCUN_1640
Sugar ABC superfamily ATP binding cassette transporter, membrane protein.
 0.931
BCUN_1703
Sugar ABC transporter permease.
 0.929
BCUN_0670
ABC transporter, solute-binding protein.
 
 0.911
BCUN_1071
ABC transporter, permease protein, probably Saturated and unsaturated oligogalacturonide transporter.
 
   0.906
BCUN_2041
Binding-protein-dependent transport system inner membrane protein.
   0.902
BCUN_2096
ABC transporter, permease protein.
 
 0.889
Your Current Organism:
Bifidobacterium cuniculi
NCBI taxonomy Id: 1688
Other names: AS 1.2239, ATCC 27916, B. cuniculi, BCRC 14672, CCRC 14672, CCRC:14672, CCUG 24610, CIP 103379, DSM 20435, LMG 10738, LMG:10738, strain RA93
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.