STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
thrBHomoserine kinase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily. (328 aa)    
Predicted Functional Partners:
BCUN_0956
Threonine synthase.
 
 0.999
BCUN_0694
Homoserine dehydrogenase.
 
 0.998
metE
5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase; Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation; Belongs to the vitamin-B12 independent methionine synthase family.
   
 
 0.926
BCUN_1563
Cystathionine beta-lyase.
  
 
 0.918
BCUN_0442
Branched-chain amino acid aminotransferase.
  
 
 0.917
BCUN_0297
L-serine ammonia-lyase.
  
 
 0.911
BCUN_0325
Cysteine synthase A; Belongs to the cysteine synthase/cystathionine beta- synthase family.
     
 0.907
BCUN_0197
O-acetylhomoserine sulfhydrylase.
    
  0.900
BCUN_1564
Cysteine synthase.
    
  0.900
BCUN_1648
O-acetylhomoserine (thiol-lyase).
    
  0.900
Your Current Organism:
Bifidobacterium cuniculi
NCBI taxonomy Id: 1688
Other names: AS 1.2239, ATCC 27916, B. cuniculi, BCRC 14672, CCRC 14672, CCRC:14672, CCUG 24610, CIP 103379, DSM 20435, LMG 10738, LMG:10738, strain RA93
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