STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BCUN_0698Putative alpha-amylase; Belongs to the glycosyl hydrolase 13 family. (1429 aa)    
Predicted Functional Partners:
BCUN_1552
PTS system glucose-specific EIIBCA component.
  
 
 0.870
BCUN_1477
Endo-1,4-beta-glucanase; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
 
  
 0.711
BCUN_1008
Amino acid transporter.
    
  0.654
BCUN_1237
Cationic amino acid transporter.
    
  0.654
BCUN_1245
Amino acid permease-associated protein.
    
  0.654
BCUN_1537
Glutamate/gamma-aminobutyrate antiporter.
    
  0.654
BCUN_1797
Amino acid permease.
    
  0.654
BCUN_2058
Putative amino acid transporter.
    
  0.654
BCUN_2029
Pullulanase; Belongs to the glycosyl hydrolase 13 family.
 
 
  0.487
BCUN_0354
Pullulanase.
 
 
 
0.458
Your Current Organism:
Bifidobacterium cuniculi
NCBI taxonomy Id: 1688
Other names: AS 1.2239, ATCC 27916, B. cuniculi, BCRC 14672, CCRC 14672, CCRC:14672, CCUG 24610, CIP 103379, DSM 20435, LMG 10738, LMG:10738, strain RA93
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