STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BCUN_0709Pentose ABC transporter ATP binding protein. (255 aa)    
Predicted Functional Partners:
BCUN_0705
Xylose ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family.
 
 0.993
BCUN_0707
Pentose ABC transporter substrate-binding protein.
 
 0.987
BCUN_2215
Monosaccharide ABC transporter membrane protein; Belongs to the binding-protein-dependent transport system permease family.
 0.971
BCUN_0706
Xylose ABC transporter ATPase.
 
  
 
0.945
BCUN_2216
D-ribose-binding protein rbsB.
 0.932
BCUN_1573
ABC transporter.
 
  
0.857
BCUN_0708
NagC/XylR family repressor.
 
    0.817
BCUN_1572
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
  
 0.754
BCUN_2217
RbsD/FucU transport family protein; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose.
  
  
 0.682
BCUN_0751
ABC-type xylose transport system protein.
  
 
 0.663
Your Current Organism:
Bifidobacterium cuniculi
NCBI taxonomy Id: 1688
Other names: AS 1.2239, ATCC 27916, B. cuniculi, BCRC 14672, CCRC 14672, CCRC:14672, CCUG 24610, CIP 103379, DSM 20435, LMG 10738, LMG:10738, strain RA93
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.