STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BCUN_0730Relaxase/mobilization nuclease family protein. (458 aa)    
Predicted Functional Partners:
BCUN_0721
Conjugal transfer protein TraD.
 
     0.779
BCUN_0717
Putative integral membrane protein.
  
     0.773
BCUN_0718
ATP/GTP-binding protein.
  
     0.772
BCUN_0020
Putative YycO.
  
     0.670
BCUN_0592
Phage protein.
  
     0.614
BCUN_1936
Collagen-binding protein, peptidoglycan linked protein (LPXTG motif).
  
     0.566
BCUN_0884
Cell division protein FtsK.
  
     0.553
BCUN_0731
Fic/DOC family protein.
       0.526
BCUN_0878
Cell division protein FtsK.
  
     0.460
BCUN_2059
Putative TetR-family transcriptional regulator.
  
     0.424
Your Current Organism:
Bifidobacterium cuniculi
NCBI taxonomy Id: 1688
Other names: AS 1.2239, ATCC 27916, B. cuniculi, BCRC 14672, CCRC 14672, CCRC:14672, CCUG 24610, CIP 103379, DSM 20435, LMG 10738, LMG:10738, strain RA93
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.