STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BCUN_0798Membrane channel protein; Belongs to the MIP/aquaporin (TC 1.A.8) family. (319 aa)    
Predicted Functional Partners:
BCUN_1369
Phosphoprotein phosphatase.
  
 
   0.797
BCUN_1151
Reductase.
  
 
   0.779
BCUN_0637
Putative phosphoprotein phosphatase.
    
   0.771
BCUN_1207
Aldo/keto reductase family oxidoreductase.
    
   0.745
BCUN_1903
Putative aldo/keto reductase.
    
   0.745
BCUN_1552
PTS system glucose-specific EIIBCA component.
   
  
 0.698
BCUN_1828
Global nitrogen regulator NtcA.
   
 0.690
cmk
Ribosome-associated GTPase EngA; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the cytidylate kinase family. Type 1 subfamily.
  
    0.689
BCUN_0797
Pseudouridine synthase; Belongs to the pseudouridine synthase RsuA family.
       0.688
BCUN_0162
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
    
   0.681
Your Current Organism:
Bifidobacterium cuniculi
NCBI taxonomy Id: 1688
Other names: AS 1.2239, ATCC 27916, B. cuniculi, BCRC 14672, CCRC 14672, CCRC:14672, CCUG 24610, CIP 103379, DSM 20435, LMG 10738, LMG:10738, strain RA93
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