STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BCUN_0897ABC transporter ATP-binding protein. (307 aa)    
Predicted Functional Partners:
BCUN_0893
ABC transporter ATP-binding protein.
 
0.999
BCUN_1195
Biotin biosynthesis protein BioY.
   
 0.997
BCUN_0927
Hydroxymethylpyrimidine transport ATP-binding protein.
  
0.959
BCUN_0199
Cobalt transport protein.
  
 0.958
BCUN_1038
Cobalt ABC transporter permease.
  
 0.920
BCUN_0898
Hypothetical protein.
       0.853
BCUN_1602
Peptide ABC transporter, ATP-binding protein.
 
  0.769
BCUN_1601
Peptides ABC transporter ATP-binding protein.
 
  0.743
BCUN_0899
Putative tetratricopeptide repeat-containing domain protein.
       0.721
BCUN_0765
ABC transporter ATP-binding protein.
  
 
  0.700
Your Current Organism:
Bifidobacterium cuniculi
NCBI taxonomy Id: 1688
Other names: AS 1.2239, ATCC 27916, B. cuniculi, BCRC 14672, CCRC 14672, CCRC:14672, CCUG 24610, CIP 103379, DSM 20435, LMG 10738, LMG:10738, strain RA93
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