STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BCUN_0968ABC transporter substrate-binding protein. (277 aa)    
Predicted Functional Partners:
BCUN_2168
Glutamate ABC transporter permease.
 
 0.991
BCUN_2169
Glutamate ABC transporter permease.
 
 0.980
BCUN_2166
Glutamate ABC transporter ATP-binding protein.
 
 0.967
BCUN_2167
Amino acid ABC transporter substrate-binding protein; Belongs to the bacterial solute-binding protein 3 family.
  
  
 
0.915
BCUN_0967
Magnesium and cobalt transport protein.
   
   0.868
BCUN_1016
Glutamine transport ATP-binding protein glnQ.
 
 0.796
leuS
leucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
       0.762
BCUN_1017
Amino acid ABC transporter substrate-binding protein.
  
  
  0.701
BCUN_0966
Phosphoglycerate mutase.
       0.674
BCUN_1592
ABC transporter ATP-binding protein.
 
 0.662
Your Current Organism:
Bifidobacterium cuniculi
NCBI taxonomy Id: 1688
Other names: AS 1.2239, ATCC 27916, B. cuniculi, BCRC 14672, CCRC 14672, CCRC:14672, CCUG 24610, CIP 103379, DSM 20435, LMG 10738, LMG:10738, strain RA93
Server load: low (8%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.