Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
BCUN_1016Glutamine transport ATP-binding protein glnQ. (270 aa)    
Predicted Functional Partners:
BCUN_1014
ABC transporter permease.
 
 0.999
BCUN_1015
Amino acid ABC transporter permease.
 
 0.999
BCUN_1017
Amino acid ABC transporter substrate-binding protein.
 
 
 0.978
BCUN_2169
Glutamate ABC transporter permease.
 
 0.971
BCUN_2168
Glutamate ABC transporter permease.
 
 0.968
BCUN_1591
ABC transporter permease.
 0.965
BCUN_2167
Amino acid ABC transporter substrate-binding protein; Belongs to the bacterial solute-binding protein 3 family.
 
 
 0.888
BCUN_0968
ABC transporter substrate-binding protein.
 
 
 0.731
BCUN_1590
ABC transporter substrate-binding protein.
 
 
 0.714
BCUN_1589
ABC transporter, substrate-binding protein, family 3.
 
 
 0.676
Your Current Organism:
Bifidobacterium cuniculi
NCBI taxonomy Id: 1688
Other names: AS 1.2239, ATCC 27916, B. cuniculi, BCRC 14672, CCRC 14672, CCRC:14672, CCUG 24610, CIP 103379, DSM 20435, LMG 10738, LMG:10738, strain RA93
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