STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BCUN_1198Fatty acid synthase. (3027 aa)    
Predicted Functional Partners:
BCUN_1196
JadJ.
  
 
 0.987
BCUN_1404
L-2.3-butanediol dehydrogenase.
  
 0.971
BCUN_1197
accD Acetyl-/propionyl-CoA carboxylase subunit beta.
 
 
 0.945
BCUN_1913
Short chain dehydrogenase.
  
 0.927
BCUN_2205
Citrate synthase 1; Belongs to the citrate synthase family.
   
 0.913
BCUN_0436
long-chain-fatty-acid-CoA ligase.
     
 0.900
BCUN_0755
Long-chain-fatty acid CoA ligase.
     
 0.900
BCUN_2219
Long-chain-fatty acid CoA ligase.
     
 0.900
BCUN_2220
long-chain-fatty-acid--CoA ligase.
     
 0.900
acpS
4'-phosphopantetheinyl transferase; Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein; Belongs to the P-Pant transferase superfamily. AcpS family.
 
   
 0.898
Your Current Organism:
Bifidobacterium cuniculi
NCBI taxonomy Id: 1688
Other names: AS 1.2239, ATCC 27916, B. cuniculi, BCRC 14672, CCRC 14672, CCRC:14672, CCUG 24610, CIP 103379, DSM 20435, LMG 10738, LMG:10738, strain RA93
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.