Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
BCUN_1237Cationic amino acid transporter. (533 aa)    
Predicted Functional Partners:
BCUN_1238
Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.
       0.643
murB
UDP-N-acetylenolpyruvoylglucosamine reductase; Cell wall formation.
  
    0.639
BCUN_1245
Amino acid permease-associated protein.
  
     0.625
BCUN_1239
Succinyldiaminopimelate transaminase.
  
    0.606
rpmG
50S ribosomal protein L33; Belongs to the bacterial ribosomal protein bL33 family.
       0.577
nadE
Glutamine-dependent NAD() synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
   
 0.501
BCUN_1402
NAD synthetase; In the C-terminal section; belongs to the NAD synthetase family.
   
 0.501
BCUN_2058
Putative amino acid transporter.
  
     0.449
BCUN_2191
Threonine dehydratase.
  
 0.438
BCUN_1943
Ethanolamine transporter.
  
  
0.416
Your Current Organism:
Bifidobacterium cuniculi
NCBI taxonomy Id: 1688
Other names: AS 1.2239, ATCC 27916, B. cuniculi, BCRC 14672, CCRC 14672, CCRC:14672, CCUG 24610, CIP 103379, DSM 20435, LMG 10738, LMG:10738, strain RA93
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