STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BCUN_1237Cationic amino acid transporter. (533 aa)    
Predicted Functional Partners:
BCUN_1238
Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.
       0.662
murB
UDP-N-acetylenolpyruvoylglucosamine reductase; Cell wall formation.
  
    0.656
BCUN_0339
Alpha-amylase.
    
  0.654
BCUN_0354
Pullulanase.
    
  0.654
BCUN_0356
Pullulanase.
    
  0.654
BCUN_0664
Trehalose-6-phosphate hydrolase.
    
  0.654
BCUN_0698
Putative alpha-amylase; Belongs to the glycosyl hydrolase 13 family.
    
  0.654
BCUN_2018
Alpha glucosidase.
    
  0.654
BCUN_2025
Glycosylase.
    
  0.654
BCUN_2190
Oligo-1,6-glucosidase.
    
  0.654
Your Current Organism:
Bifidobacterium cuniculi
NCBI taxonomy Id: 1688
Other names: AS 1.2239, ATCC 27916, B. cuniculi, BCRC 14672, CCRC 14672, CCRC:14672, CCUG 24610, CIP 103379, DSM 20435, LMG 10738, LMG:10738, strain RA93
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.