Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BCUN_0113 | BCUN_0564 | BCUN_0113 | BCUN_0564 | Exodeoxyribonuclease. | DNA polymerase III subunit beta. | 0.848 |
BCUN_0113 | BCUN_1439 | BCUN_0113 | BCUN_1439 | Exodeoxyribonuclease. | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.848 |
BCUN_0113 | nth | BCUN_0113 | BCUN_0660 | Exodeoxyribonuclease. | Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. | 0.998 |
BCUN_0113 | ung | BCUN_0113 | BCUN_1320 | Exodeoxyribonuclease. | uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine. | 0.879 |
BCUN_0564 | BCUN_0113 | BCUN_0564 | BCUN_0113 | DNA polymerase III subunit beta. | Exodeoxyribonuclease. | 0.848 |
BCUN_0564 | BCUN_1439 | BCUN_0564 | BCUN_1439 | DNA polymerase III subunit beta. | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.455 |
BCUN_0564 | ung | BCUN_0564 | BCUN_1320 | DNA polymerase III subunit beta. | uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine. | 0.795 |
BCUN_1314 | BCUN_1315 | BCUN_1314 | BCUN_1315 | Hypothetical protein. | Von Willebrand factor, type A. | 0.853 |
BCUN_1314 | BCUN_1316 | BCUN_1314 | BCUN_1316 | Hypothetical protein. | Von willebrand factor type a-like protein. | 0.853 |
BCUN_1314 | BCUN_1317 | BCUN_1314 | BCUN_1317 | Hypothetical protein. | Hypothetical protein. | 0.853 |
BCUN_1314 | BCUN_1318 | BCUN_1314 | BCUN_1318 | Hypothetical protein. | Hypothetical protein. | 0.853 |
BCUN_1314 | BCUN_1319 | BCUN_1314 | BCUN_1319 | Hypothetical protein. | Magnesium chelatase family protein. | 0.853 |
BCUN_1314 | ung | BCUN_1314 | BCUN_1320 | Hypothetical protein. | uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine. | 0.648 |
BCUN_1315 | BCUN_1314 | BCUN_1315 | BCUN_1314 | Von Willebrand factor, type A. | Hypothetical protein. | 0.853 |
BCUN_1315 | BCUN_1316 | BCUN_1315 | BCUN_1316 | Von Willebrand factor, type A. | Von willebrand factor type a-like protein. | 0.965 |
BCUN_1315 | BCUN_1317 | BCUN_1315 | BCUN_1317 | Von Willebrand factor, type A. | Hypothetical protein. | 0.853 |
BCUN_1315 | BCUN_1318 | BCUN_1315 | BCUN_1318 | Von Willebrand factor, type A. | Hypothetical protein. | 0.962 |
BCUN_1315 | BCUN_1319 | BCUN_1315 | BCUN_1319 | Von Willebrand factor, type A. | Magnesium chelatase family protein. | 0.909 |
BCUN_1315 | ung | BCUN_1315 | BCUN_1320 | Von Willebrand factor, type A. | uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine. | 0.648 |
BCUN_1316 | BCUN_1314 | BCUN_1316 | BCUN_1314 | Von willebrand factor type a-like protein. | Hypothetical protein. | 0.853 |
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