STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BCUN_1326Response regulator. (244 aa)    
Predicted Functional Partners:
BCUN_1327
Sensor protein.
 0.989
BCUN_0311
Sensor protein.
 0.979
BCUN_1190
Histidine kinase sensor of two component system.
 
 0.976
BCUN_1325
Membrane associated protein.
  
  
 0.734
BCUN_1328
Cold shock protein.
     
 0.695
BCUN_1329
Hypothetical protein.
       0.694
BCUN_1324
Type VII secretion system target protein; Belongs to the WXG100 family.
     
 0.476
BCUN_0161
GTP diphosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.
   
 
 0.407
BCUN_1552
PTS system glucose-specific EIIBCA component.
      
 0.407
BCUN_1828
Global nitrogen regulator NtcA.
   
 0.407
Your Current Organism:
Bifidobacterium cuniculi
NCBI taxonomy Id: 1688
Other names: AS 1.2239, ATCC 27916, B. cuniculi, BCRC 14672, CCRC 14672, CCRC:14672, CCUG 24610, CIP 103379, DSM 20435, LMG 10738, LMG:10738, strain RA93
Server load: low (16%) [HD]