Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
BCUN_0574 | BCUN_0886 | Type I restriction-modification system methyltransferase subunit. | Restriction enzyme BgcI subunit alpha. | 0.976 |
BCUN_0574 | BCUN_1388 | Type I restriction-modification system methyltransferase subunit. | Putative ATP-binding protein. | 0.458 |
BCUN_0574 | BCUN_1390 | Type I restriction-modification system methyltransferase subunit. | Type IIS restriction enzyme. | 0.458 |
BCUN_0574 | BCUN_1392 | Type I restriction-modification system methyltransferase subunit. | Alkaline phosphatase domain-containing protein. | 0.418 |
BCUN_0886 | BCUN_0574 | Restriction enzyme BgcI subunit alpha. | Type I restriction-modification system methyltransferase subunit. | 0.976 |
BCUN_0886 | BCUN_1388 | Restriction enzyme BgcI subunit alpha. | Putative ATP-binding protein. | 0.447 |
BCUN_0886 | BCUN_1390 | Restriction enzyme BgcI subunit alpha. | Type IIS restriction enzyme. | 0.450 |
BCUN_0886 | BCUN_1392 | Restriction enzyme BgcI subunit alpha. | Alkaline phosphatase domain-containing protein. | 0.409 |
BCUN_1384 | BCUN_1386 | DNA-binding protein. | Hypothetical protein. | 0.503 |
BCUN_1384 | BCUN_1387 | DNA-binding protein. | Putative cytoplasmic protein. | 0.446 |
BCUN_1384 | BCUN_1388 | DNA-binding protein. | Putative ATP-binding protein. | 0.458 |
BCUN_1384 | BCUN_1390 | DNA-binding protein. | Type IIS restriction enzyme. | 0.466 |
BCUN_1384 | BCUN_1391 | DNA-binding protein. | PglZ domain protein. | 0.455 |
BCUN_1384 | BCUN_1392 | DNA-binding protein. | Alkaline phosphatase domain-containing protein. | 0.421 |
BCUN_1386 | BCUN_1384 | Hypothetical protein. | DNA-binding protein. | 0.503 |
BCUN_1386 | BCUN_1387 | Hypothetical protein. | Putative cytoplasmic protein. | 0.931 |
BCUN_1386 | BCUN_1388 | Hypothetical protein. | Putative ATP-binding protein. | 0.914 |
BCUN_1386 | BCUN_1390 | Hypothetical protein. | Type IIS restriction enzyme. | 0.866 |
BCUN_1386 | BCUN_1391 | Hypothetical protein. | PglZ domain protein. | 0.844 |
BCUN_1386 | BCUN_1392 | Hypothetical protein. | Alkaline phosphatase domain-containing protein. | 0.835 |
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