STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BCUN_14052-hydroxycyclohexanecarboxyl-CoA dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (244 aa)    
Predicted Functional Partners:
BCUN_1915
Alcohol dehydrogenase.
 
  
  0.745
BCUN_1281
Low-specificity L-threonine aldolase.
    
  0.652
BCUN_2015
Nitro/flavin reductase; Belongs to the flavin oxidoreductase frp family.
    
  0.644
gmk
Guanylate kinase; Essential for recycling GMP and indirectly, cGMP.
      0.546
BCUN_1399
3-oxiacil-(acyl-carrier-protein) reductase.
 
 
  0.494
BCUN_0067
Hypothetical protein.
  
     0.493
BCUN_1636
Xylulokinase.
 
  
  0.489
BCUN_1196
JadJ.
 
 
 0.472
BCUN_0274
Short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
  
 
0.460
BCUN_1944
Aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
    
  0.446
Your Current Organism:
Bifidobacterium cuniculi
NCBI taxonomy Id: 1688
Other names: AS 1.2239, ATCC 27916, B. cuniculi, BCRC 14672, CCRC 14672, CCRC:14672, CCUG 24610, CIP 103379, DSM 20435, LMG 10738, LMG:10738, strain RA93
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