STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BCUN_1507transRDD family protein. (372 aa)    
Predicted Functional Partners:
BCUN_1373
Serine-threonine protein kinase.
   
 
 0.999
BCUN_1506
DNA segregation ATPase-like protein.
 
     0.829
BCUN_0462
Glutamate synthase.
    
   0.777
BCUN_1508
Hypothetical protein.
       0.773
BCUN_1509
Hypothetical protein.
       0.731
BCUN_0633
Large protein with C- fibronectin type III domain protein.
 
     0.695
BCUN_1427
Integral membrane protein MviN.
    
   0.677
BCUN_0632
Putative serine/threonine-protein kinase PknK.
 
 
   0.663
BCUN_0636
Transglutaminase domain-containing protein.
 
     0.651
BCUN_0519
Pentapeptide repeat protein.
  
 
 0.601
Your Current Organism:
Bifidobacterium cuniculi
NCBI taxonomy Id: 1688
Other names: AS 1.2239, ATCC 27916, B. cuniculi, BCRC 14672, CCRC 14672, CCRC:14672, CCUG 24610, CIP 103379, DSM 20435, LMG 10738, LMG:10738, strain RA93
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.