STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BCUN_1569Hypothetical protein; Belongs to the uroporphyrinogen decarboxylase family. (344 aa)    
Predicted Functional Partners:
BCUN_0462
Glutamate synthase.
    
 0.864
BCUN_1735
Flavin containing amine oxidoreductase.
  
 
 0.842
BCUN_1570
Hypothetical protein.
       0.768
BCUN_1571
Extracellular ligand-binding receptor.
       0.700
BCUN_1573
ABC transporter.
  
  
 0.690
BCUN_0753
Inosine 5-monophosphate dehydrogenase.
   
 0.603
BCUN_1572
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
       0.558
BCUN_0461
Oxygen-independent coproporphyrinogen III oxidase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family.
  
 
 0.524
BCUN_1563
Cystathionine beta-lyase.
    
  0.502
BCUN_1568
Large tegument protein.
       0.436
Your Current Organism:
Bifidobacterium cuniculi
NCBI taxonomy Id: 1688
Other names: AS 1.2239, ATCC 27916, B. cuniculi, BCRC 14672, CCRC 14672, CCRC:14672, CCUG 24610, CIP 103379, DSM 20435, LMG 10738, LMG:10738, strain RA93
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