STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BCUN_1675ABC transporter substrate-binding protein. (352 aa)    
Predicted Functional Partners:
BCUN_1676
Putative permease protein of ABC transporter system.
 
 0.994
BCUN_0115
Mn2+/Zn2+ ABC transporter permease.
  
 
 0.737
BCUN_1482
Oxidoreductase.
 
 
  0.646
BCUN_1149
Hypothetical protein.
  
 
 0.601
BCUN_1287
Membrane spanning protein.
  
 
 0.601
BCUN_1454
Oxidoreductase.
  
 
  0.584
BCUN_0462
Glutamate synthase.
   
  
 0.546
BCUN_1573
ABC transporter.
    
 0.482
BCUN_1677
LacI-type transcriptional regulator.
       0.463
BCUN_1500
NAD-dependent oxidoreductase.
    
 0.415
Your Current Organism:
Bifidobacterium cuniculi
NCBI taxonomy Id: 1688
Other names: AS 1.2239, ATCC 27916, B. cuniculi, BCRC 14672, CCRC 14672, CCRC:14672, CCUG 24610, CIP 103379, DSM 20435, LMG 10738, LMG:10738, strain RA93
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.