STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BCUN_1936Collagen-binding protein, peptidoglycan linked protein (LPXTG motif). (306 aa)    
Predicted Functional Partners:
BCUN_1858
Leucine-rich repeat (LRR) protein.
   
   0.691
BCUN_0394
Hypothetical protein.
   
   0.690
BCUN_0399
Phage portal protein.
   
   0.690
BCUN_1472
Bifunctional beta-D-glucosidase/beta-D-fucosidase.
   
   0.690
BCUN_2134
Galactofuranosyltransferase.
  
 
   0.644
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
    
  0.618
BCUN_0397
Serine/arginine repetitive matrix protein 2.
   
   0.603
BCUN_1926
Hypothetical protein.
   
   0.603
BCUN_0730
Relaxase/mobilization nuclease family protein.
  
     0.566
BCUN_0718
ATP/GTP-binding protein.
 
    0.469
Your Current Organism:
Bifidobacterium cuniculi
NCBI taxonomy Id: 1688
Other names: AS 1.2239, ATCC 27916, B. cuniculi, BCRC 14672, CCRC 14672, CCRC:14672, CCUG 24610, CIP 103379, DSM 20435, LMG 10738, LMG:10738, strain RA93
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.