STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BCUN_1985Membrane-bound transglycosylase. (355 aa)    
Predicted Functional Partners:
BCUN_1212
Large Ala/Glu-rich protein.
  
  
 0.780
rsmA
Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.
  
  
 0.758
BCUN_0158
DNA binding protein.
  
     0.751
BCUN_0308
Cytosolic protein.
  
     0.677
BCUN_1743
Orotate phosphoribosyltransferase.
  
     0.648
BCUN_0306
Membrane spanning protein.
  
     0.646
BCUN_2123
Putative deoxyribonuclease.
 
   
 0.612
BCUN_1689
Putative DivIVA domain protein.
  
     0.607
BCUN_1310
Hypothetical protein.
  
     0.602
BCUN_0114
Cytosolic protein.
  
     0.600
Your Current Organism:
Bifidobacterium cuniculi
NCBI taxonomy Id: 1688
Other names: AS 1.2239, ATCC 27916, B. cuniculi, BCRC 14672, CCRC 14672, CCRC:14672, CCUG 24610, CIP 103379, DSM 20435, LMG 10738, LMG:10738, strain RA93
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.