STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BCUN_2001Filamentation induced by cAMP protein fic. (403 aa)    
Predicted Functional Partners:
BCUN_1029
Putative bacterial regulatory protein.
  
     0.767
BCUN_1552
PTS system glucose-specific EIIBCA component.
     
  0.684
BCUN_0743
Fic family protein.
  
     0.679
BCUN_1251
ATPase (AAA superfamily)-like protein.
 
     0.639
BCUN_2192
Transcriptional regulator.
 
     0.555
BCUN_1619
ATP-binding protein.
 
     0.461
BCUN_1578
AAA/ superfamily protein.
 
     0.460
dnaK
Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
    
   0.450
BCUN_2002
Hypothetical protein.
       0.432
Your Current Organism:
Bifidobacterium cuniculi
NCBI taxonomy Id: 1688
Other names: AS 1.2239, ATCC 27916, B. cuniculi, BCRC 14672, CCRC 14672, CCRC:14672, CCUG 24610, CIP 103379, DSM 20435, LMG 10738, LMG:10738, strain RA93
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.