STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BCUN_2015Nitro/flavin reductase; Belongs to the flavin oxidoreductase frp family. (253 aa)    
Predicted Functional Partners:
BCUN_1545
Riboflavin kinase.
    
 0.867
BCUN_1405
2-hydroxycyclohexanecarboxyl-CoA dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
    
  0.664
BCUN_2017
Phosphoglycerate mutase family protein.
    
  0.636
BCUN_2016
Membrane associated protein.
       0.626
BCUN_0462
Glutamate synthase.
     
 0.522
BCUN_1574
Short chain dehydrogenase.
    
  0.518
BCUN_1249
Glyoxalase/bleomycin resistance protein/dioxygenase.
  
  
 0.474
BCUN_0654
NADH-dependent flavin oxidoreductase YqjM.
  
 
 0.429
BCUN_0124
Transporter.
  
    0.428
BCUN_0125
Multidrug ABC transporter permease.
  
    0.428
Your Current Organism:
Bifidobacterium cuniculi
NCBI taxonomy Id: 1688
Other names: AS 1.2239, ATCC 27916, B. cuniculi, BCRC 14672, CCRC 14672, CCRC:14672, CCUG 24610, CIP 103379, DSM 20435, LMG 10738, LMG:10738, strain RA93
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.