STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BCUN_2043lacto-N-biose phosphorylase. (720 aa)    
Predicted Functional Partners:
BCUN_2044
Phosphotransferase.
 
   
 0.952
BCUN_2045
Putative UTP--hexose-1-phosphate uridylyltransferase.
 
     0.879
BCUN_2040
ABC transporter substrate-binding protein.
 
     0.790
BCUN_2039
Dockerin type I repeat-containing domain protein.
 
     0.703
BCUN_2041
Binding-protein-dependent transport system inner membrane protein.
 
     0.675
BCUN_2042
Sugar ABC transporter permease.
 
     0.660
BCUN_2046
Hydrolase.
     
 0.503
BCUN_1708
Transferase.
  
     0.429
Your Current Organism:
Bifidobacterium cuniculi
NCBI taxonomy Id: 1688
Other names: AS 1.2239, ATCC 27916, B. cuniculi, BCRC 14672, CCRC 14672, CCRC:14672, CCUG 24610, CIP 103379, DSM 20435, LMG 10738, LMG:10738, strain RA93
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.