Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BCUN_2188Alpha-galactosidase. (59 aa)    
Predicted Functional Partners:
BCUN_2076
Glycosidase.
  
  
  0.900
BCUN_2122
Alpha-galactosidase.
  
  
  0.895
BCUN_2190
Oligo-1,6-glucosidase.
  
 
 0.752
BCUN_1067
Family 42 glycoside hydrolase.
 
  
 0.710
BCUN_2018
Alpha glucosidase.
   
 
 0.663
BCUN_1678
Beta-(1-2)-fructofuranosidase; Belongs to the glycosyl hydrolase 32 family.
    
 0.655
BCUN_0082
Aldose 1-epimerase.
    
 0.648
BCUN_1775
Beta-galactosidase.
  
 
 0.648
araA
L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose.
     
  0.636
BCUN_2102
Beta-galactosidase.
    
 0.628
Your Current Organism:
Bifidobacterium cuniculi
NCBI taxonomy Id: 1688
Other names: AS 1.2239, ATCC 27916, B. cuniculi, BCRC 14672, CCRC 14672, CCRC:14672, CCUG 24610, CIP 103379, DSM 20435, LMG 10738, LMG:10738, strain RA93
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