STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900119695_00637Unannotated protein. (281 aa)    
Predicted Functional Partners:
GCA_900119695_00459
Unannotated protein.
 
  
 0.994
GCA_900119695_00463
Unannotated protein.
 
 
 0.988
GCA_900119695_01074
Unannotated protein.
  
  
 0.878
GCA_900119695_00638
Unannotated protein.
       0.787
GCA_900119695_00639
Unannotated protein.
       0.768
GCA_900119695_00461
Unannotated protein.
 
   
 0.655
GCA_900119695_00462
Unannotated protein.
 
  
 0.517
GCA_900119695_00809
Unannotated protein.
 
   
 0.512
GCA_900119695_00642
Unannotated protein.
  
    0.511
GCA_900119695_00640
Unannotated protein.
       0.506
Your Current Organism:
Actinomyces urinae
NCBI taxonomy Id: 1689268
Other names: A. urinae, Actinomyces sp. FC2, CSURP 2225, DSM 100700, strain Marseille-P2225
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.