STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001457815_03511Unannotated protein. (78 aa)    
Predicted Functional Partners:
GCA_001457815_03512
Unannotated protein.
       0.768
GCA_001457815_03510
Unannotated protein.
       0.723
GCA_001457815_03513
Unannotated protein.
       0.681
GCA_001457815_03509
Unannotated protein.
       0.656
GCA_001457815_03508
Unannotated protein.
       0.579
GCA_001457815_00850
Unannotated protein.
  
     0.536
GCA_001457815_00556
Unannotated protein.
  
     0.515
GCA_001457815_00832
Unannotated protein.
  
     0.504
GCA_001457815_01997
Unannotated protein.
  
     0.498
GCA_001457815_00867
Unannotated protein.
  
     0.490
Your Current Organism:
Vitreoscilla massiliensis
NCBI taxonomy Id: 1689272
Other names: CSUR P2036, Vitreoscilla sp. SN6, strain SN6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.