STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001407835_00275Unannotated protein. (458 aa)    
Predicted Functional Partners:
GCA_001407835_00274
Unannotated protein.
 
  0.976
GCA_001407835_00273
Unannotated protein.
 
    
0.822
GCA_001407835_00278
Unannotated protein.
 
   
 0.777
GCA_001407835_00279
Unannotated protein.
 
     0.775
GCA_001407835_00270
Unannotated protein.
 
     0.765
GCA_001407835_00272
Unannotated protein.
       0.727
GCA_001407835_00271
Unannotated protein.
       0.720
GCA_001407835_01710
Unannotated protein.
  
    0.715
GCA_001407835_00430
Unannotated protein.
  
     0.634
GCA_001407835_00783
Unannotated protein.
  
  0.589
Your Current Organism:
Lagierella massiliensis
NCBI taxonomy Id: 1689303
Other names: CSUR P2012, L. massiliensis, Peptoniphilaceae bacterium SIT14, strain SIT14
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.