STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001407835_00334Unannotated protein. (462 aa)    
Predicted Functional Partners:
GCA_001407835_01186
Unannotated protein.
  
 
 0.954
GCA_001407835_00971
Unannotated protein.
  
 0.940
GCA_001407835_00088
Unannotated protein.
    
  0.878
GCA_001407835_01349
Unannotated protein.
   
  0.875
GCA_001407835_01560
Unannotated protein.
     
 0.771
GCA_001407835_01724
Unannotated protein.
    
 0.757
GCA_001407835_00335
Unannotated protein.
 
    0.613
GCA_001407835_00210
Unannotated protein.
 
 
 
0.569
GCA_001407835_00336
Unannotated protein.
       0.539
GCA_001407835_00375
Unannotated protein.
  
 
 0.520
Your Current Organism:
Lagierella massiliensis
NCBI taxonomy Id: 1689303
Other names: CSUR P2012, L. massiliensis, Peptoniphilaceae bacterium SIT14, strain SIT14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.