STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001407835_00500Unannotated protein. (296 aa)    
Predicted Functional Partners:
GCA_001407835_00501
Unannotated protein.
 
  
 0.988
GCA_001407835_01696
Unannotated protein.
  
 
 0.903
GCA_001407835_00332
Unannotated protein.
 
  
 0.749
GCA_001407835_00499
Unannotated protein.
       0.529
GCA_001407835_00505
Unannotated protein.
     
 0.472
GCA_001407835_00513
Unannotated protein.
     
 0.472
GCA_001407835_00366
Unannotated protein.
  
    0.453
GCA_001407835_00507
Unannotated protein.
  
    0.421
GCA_001407835_00506
Unannotated protein.
  
    0.420
GCA_001407835_00502
Unannotated protein.
       0.404
Your Current Organism:
Lagierella massiliensis
NCBI taxonomy Id: 1689303
Other names: CSUR P2012, L. massiliensis, Peptoniphilaceae bacterium SIT14, strain SIT14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.