STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001407835_00706Unannotated protein. (134 aa)    
Predicted Functional Partners:
GCA_001407835_01657
Unannotated protein.
  
 0.986
GCA_001407835_00311
Unannotated protein.
  
 0.984
GCA_001407835_00610
Unannotated protein.
 
0.983
GCA_001407835_00474
Unannotated protein.
  
 0.980
GCA_001407835_01581
Unannotated protein.
  
 0.976
GCA_001407835_00028
Unannotated protein.
  
 0.967
GCA_001407835_00290
Unannotated protein.
  
 0.964
GCA_001407835_01664
Unannotated protein.
 
 0.949
GCA_001407835_01124
Unannotated protein.
  
  
 0.946
GCA_001407835_01123
Unannotated protein.
  
  
 0.938
Your Current Organism:
Lagierella massiliensis
NCBI taxonomy Id: 1689303
Other names: CSUR P2012, L. massiliensis, Peptoniphilaceae bacterium SIT14, strain SIT14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.