STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001407835_01450Unannotated protein. (311 aa)    
Predicted Functional Partners:
GCA_001407835_01452
Unannotated protein.
 
 
 0.997
GCA_001407835_01449
Unannotated protein.
 0.996
GCA_001407835_01476
Unannotated protein.
 
 
 0.973
GCA_001407835_01448
Unannotated protein.
    0.972
GCA_001407835_01123
Unannotated protein.
    
 0.947
GCA_001407835_01454
Unannotated protein.
  
   0.932
GCA_001407835_00610
Unannotated protein.
    
 0.916
GCA_001407835_00303
Unannotated protein.
    
 0.914
GCA_001407835_01739
Unannotated protein.
   
 
 0.908
GCA_001407835_00315
Unannotated protein.
  
 
 0.895
Your Current Organism:
Lagierella massiliensis
NCBI taxonomy Id: 1689303
Other names: CSUR P2012, L. massiliensis, Peptoniphilaceae bacterium SIT14, strain SIT14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.