STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001407835_01529Unannotated protein. (187 aa)    
Predicted Functional Partners:
GCA_001407835_01530
Unannotated protein.
 
 0.999
GCA_001407835_01531
Unannotated protein.
 
 
 0.979
GCA_001407835_01528
Unannotated protein.
  
  
 0.966
GCA_001407835_00439
Unannotated protein.
 
 0.955
GCA_001407835_00468
Unannotated protein.
 
 
 0.943
GCA_001407835_01351
Unannotated protein.
 
 
 0.898
GCA_001407835_00438
Unannotated protein.
  
 
 0.892
GCA_001407835_00555
Unannotated protein.
  
 
 0.853
GCA_001407835_00986
Unannotated protein.
  
 
 0.835
GCA_001407835_00380
Unannotated protein.
  
 0.834
Your Current Organism:
Lagierella massiliensis
NCBI taxonomy Id: 1689303
Other names: CSUR P2012, L. massiliensis, Peptoniphilaceae bacterium SIT14, strain SIT14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.