STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KZB64470.1Alpha/beta hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (361 aa)    
Predicted Functional Partners:
KZB60564.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.819
KZB67265.1
Multidrug transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.651
KZB64551.1
Poly(3-hydroxyalkanoate) synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.642
KZB65752.1
3-hydroxybutyrate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.525
KZB63145.1
Conjugal transfer protein TraG; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.524
KZB61129.1
Conjugal transfer protein TraG; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.524
KZB64501.1
Phospholipase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.468
KZB61835.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.464
tenA
Thiaminase II; Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway; Belongs to the TenA family.
  
 
  0.454
KZB69094.1
Polyhydroxyalkanoate synthesis repressor; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.436
Your Current Organism:
Thalassospira lucentensis
NCBI taxonomy Id: 168935
Other names: CECT 5390, DSM 14000, T. lucentensis, Thalassospira lucentensis Lopez-Lopez et al. 2002, strain QMT2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.